Blar i Bergen Open Research Archive på forfatter "Kuznetsova, Ksenia"

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    • Finding haplotypic signatures in proteins 

      Vasicek, Jakub; Skiadopoulou, Dafni; Kuznetsova, Ksenia; Wen, Bo; Johansson, Stefan; Njølstad, Pål Rasmus; Bruckner, Stefan; Käll, Lukas; Vaudel, Marc (Journal article; Peer reviewed, 2023)
      Background The nonrandom distribution of alleles of common genomic variants produces haplotypes, which are fundamental in medical and population genetic studies. Consequently, protein-coding genes with different ...

    • Proteomic Analysis of Zebrafish Protein Recoding via mRNA Editing by ADAR Enzymes 

      Nasaev, Shamsudin S.; Kopeykina, Anna S.; Kuznetsova, Ksenia; Levitsky, Lev I.; Moshkovskii, Sergei A. (Journal article; Peer reviewed, 2022)
      RNA editing by adenosine deaminases of the ADAR family can lead to protein recoding, since inosine formed from adenosine in mRNA is complementary to cytosine; the resulting codon editing might introduce amino acid substitutions ...

    • Retention Time and Fragmentation Predictors Increase Confidence in Identification of Common Variant Peptides 

      Skiadopoulou, Dafni; Vasicek, Jakub; Kuznetsova, Ksenia; Bouyssié, David; Käll, Lukas; Vaudel, Marc (Journal article; Peer reviewed, 2023)
      Precision medicine focuses on adapting care to the individual profile of patients, for example, accounting for their unique genetic makeup. Being able to account for the effect of genetic variation on the proteome holds ...